Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHHYRLPLRRTPPGGSDYALALLLALGGALPASAADAPAPAEEAPPLAGSAPAKADTALGKVTVTARRREEDSQKVPTPITVLGGETLEAQRISRVQDLQQVLPSVNVAYIHA-RQSSVAVRGIGNNPASDGLEGSAGIYLDNVYLGRPG-----------------MAVFDLLDIEQLELLRGPQGTLFGKNTTAGVLNISTRAPTFT------AERTVEVSGGQDGY-FQGRGTVSGPLGETLAGRLSAYRTRDDGYIKNIHD--D--------------------------------------------------------------NYLNGGERQGARGQLLFEPNE-DFSLRWIADYNEEDSSNG---SMVVYGGAERFWQRA----------ALVGASPLR--------DPQ-RRKVNINGRQHVSVHQGGSSLEANWNLAG--GYRLTSISAYRYWHFTP--ANDEQLN--------------VSA-INDTG-VEV--HDRQFSQEIRLASPTGGAFDYVV--GAYAFRQNLGNKTFTSY-GPL---A-DLY-LL---GANL------------------GA-----LNDTYSKANGKIETDSFALFAQGTWHLTERLDFTAGLRGTYEEKNAKVERFAPLGGAAVGGVGAAVRNGQLGAYDSGDLSQYNFAPSALLSLSYQFSDDLLGYASLSHGEKSGGVNLAVGSAPSAGADSLLVGPERANDAELGLKSTLFDRRLLLNANLFWTGIHGYQATTLYQAPG----STQLVQVLANAGSVRSRGLEFEATALPL---RGLTLNFNGSYNDVTYLSFKDAPCPAEVSTRPGAPSSCDLTGQRVVGASKWIANLNGEYQWRLDDRFQPYVSASYAYRSAAEGTLD--------------NSDLSKIDGYALVNLAAGLRSDLGDGQLDTSVWLKNAFDKDYYLSAFASI-----------NGSYTASVGQPRTLGVSLRYDF |
| 3V8X Chain:A ((43-904)) | --------------------------------------------------------------------------EVTGLGKLVKSSDTLSKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIRGMDKN--------RVSLTVDGVSQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSVEQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRI-GGAEALLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDSSNYAYFIVKEECKNGSYETCKANPKKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHTQQTFDTRDMTVPAFL-TKAVFDANKKQAGSLPGNGKYAGNHKYGGLFTNGENGALVGAEYGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGVGLDNHFQQTHCSADGSDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFD-KIRHNLSVNLGFDRFGSNLRHQDYYYQHANRAYSSNTPPQNNGKKISPNGSETSPYWVTIGRGNVVTGQICRLGNNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGS---------------------------VSTGTHRTLSWNAGIVLKPTDWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAGIVFKG--DFGNLEASWFNNAYRDLIVRGYEAQIKDGKEEAKGDPAYLNAQSARITGINILGKIDWNGVW---YSTFAYNRVRVRDIKKRAD--------------RTDIQSHLFDAIQPSRYVVGLGYDQPE---GKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTVK---KHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEYKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 85101 for 5183 contacts (16.4/contact) +
2D Compatibility (PS) -65496 + (NN) 15073 + (LL) 3900
1D Compatibility (HY) 1600 + (ID) 4300
Total energy: 35878.0 ( 6.92 by residue)
QMean score : 0.053
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