Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1QG1 Chain:E ((3-104))
---------------------------------------------------------HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPT----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57193 for 752 contacts (-76.1/contact) +
2D Compatibility (PS) -11044 + (NN) -7597 + (LL) 5720
1D Compatibility (HY) -13600 + (ID) 5100
Total energy: -88814.0 ( -118.10 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1QG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QG1-query.scw
PDB file :
Tito_Scwrl_1QG1.pdb
: