Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3RS7 Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY---RDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96344 for 1326 contacts (-72.7/contact) +
2D Compatibility (PS) -17752 + (NN) -3069 + (LL) 812
1D Compatibility (HY) -22800 + (ID) 8150
Total energy: -147303.0 ( -111.09 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3RS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RS7-query.scw
PDB file :
Tito_Scwrl_3RS7.pdb
: