Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
3LXO Chain:A ((1-124))
--------------------------KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3LXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45928 for 897 contacts (-51.2/contact) +
2D Compatibility (PS) -13660 + (NN) -7286 + (LL) 3136
1D Compatibility (HY) -14000 + (ID) 6200
Total energy: -83938.0 ( -93.58 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_3LXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LXO-query.scw
PDB file :
Tito_Scwrl_3LXO.pdb
: