Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH-F-RDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN
1IAU Chain:A ((1-226))
---------------------IIGGHEAKPHSRPYMAYLMIWDQKS-LKRCGGFLIRDDFVLTAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTMKR-
General information:
TITO was launched using:
RESULT:
Template:
1IAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163678 for 1939 contacts (-84.4/contact) +
2D Compatibility (PS) -23798 + (NN) -5306 + (LL) 1876
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -216856.0 ( -111.84 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_1IAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IAU-query.scw
PDB file :
Tito_Scwrl_1IAU.pdb
: