Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLKPWTAS-YDPGS--AKTILNNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSDD-HGSEHSVDGVKYAAELHLVHWNS-KYNSYATALKHADGIAVVGVFLKIGREKGEFQLLLDALDKIKTKGKEAPFNNFNPSCLFPAC-RDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQIAKLRTLYSSA--ENEPPVPLVRNWRPPQPIKGRIVKASFK |
4HT2 Chain:A ((3-262)) | ---KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD---MHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101787 for 2025 contacts (-50.3/contact) +
2D Compatibility (PS) -27420 + (NN) -19926 + (LL) 220
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -173213.0 ( -85.54 by residue)
QMean score : 0.471
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