Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
4NX5 Chain:B ((8-226))
-------VMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLL--
General information:
TITO was launched using:
RESULT:
Template:
4NX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183951 for 1924 contacts (-95.6/contact) +
2D Compatibility (PS) -23517 + (NN) -5877 + (LL) 376
1D Compatibility (HY) -32000 + (ID) 10900
Total energy: -255869.0 ( -132.99 by residue)
QMean score : 0.865
(partial model without unconserved sides chains):
PDB file :
Tito_4NX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NX5-query.scw
PDB file :
Tito_Scwrl_4NX5.pdb
: