Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
3OY8 Chain:B ((1-134))
-ACGLVASNLNLKPGE-LRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEV-ITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIK-VAFD
General information:
TITO was launched using:
RESULT:
Template:
3OY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 24131 for 965 contacts (25.0/contact) +
2D Compatibility (PS) -13380 + (NN) 2634 + (LL) 376
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: 10711.0 ( 11.10 by residue)
QMean score : 0.053
(partial model without unconserved sides chains):
PDB file :
Tito_3OY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OY8-query.scw
PDB file :
Tito_Scwrl_3OY8.pdb
: