Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
3WIZ Chain:B ((3-156))
--QSNRELVVDFLSYKLSQKGYSWSQF-------------TESE----------------------------------------AVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38026 for 778 contacts (-48.9/contact) +
2D Compatibility (PS) -15221 + (NN) -5910 + (LL) 4596
1D Compatibility (HY) -21200 + (ID) 7050
Total energy: -82811.0 ( -106.44 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_3WIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WIZ-query.scw
PDB file :
Tito_Scwrl_3WIZ.pdb
: