Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK
2WYG Chain:A ((1-234))
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNT------EAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT--------------------
General information:
TITO was launched using:
RESULT:
Template:
2WYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151981 for 1977 contacts (-76.9/contact) +
2D Compatibility (PS) -25016 + (NN) -10004 + (LL) 940
1D Compatibility (HY) -32000 + (ID) 11400
Total energy: -229461.0 ( -116.07 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_2WYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WYG-query.scw
PDB file :
Tito_Scwrl_2WYG.pdb
: