Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTE----IDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADG--LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
3QUV Chain:A ((5-231))
MKIDVVTIFPEYLQP-VRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICT---SETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN------------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL----------------------
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129830 for 1482 contacts (-87.6/contact) +
2D Compatibility (PS) -22276 + (NN) -8432 + (LL) 2592
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -180146.0 ( -121.56 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: