Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQLAVGSALFSI-VVPVLAPGL--GSTRSSALCSLGYCVWYGSAFAQALLLGCHAS-------LGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGAS--GGLCTLIYSTELKALQATHTVACLAIFVLLPLGLFGA---KGLKKAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
3V2Y Chain:A ((60-495)) | ------------------------------------------------------ENSIKLTSVVFILICCFIILENIFVLLTIWKT--KKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK--------NNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYH----KHYIL-FCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKT---------CDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226564 for 1765 contacts (-128.4/contact) +
2D Compatibility (PS) -24741 + (NN) -4050 + (LL) 3660
1D Compatibility (HY) -12400 + (ID) 1850
Total energy: -265945.0 ( -150.68 by residue)
QMean score : 0.207
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