Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMSFFLAGLTFIDIIYSSSI-SPRLISDLFFGNNSISFQSFMAQLFIEHLFGGSEVFLLLVMAYDRYVAICKPLHYLVIMRQWVCVLLLVVSWVGGFLQSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLACTDTHVIGLLVVANGGLSCTIAFLLLLISYGVILHSLKKLSQKG---------------------RQKAHSTCSSHITVVVFFFVPCIFMCARPART----F-SIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKL |
| 2Z73 Chain:A ((33-329)) | --------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYT----LEGVLCNCSFDYISRD----S-TTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -273630 for 2237 contacts (-122.3/contact) +
2D Compatibility (PS) -27237 + (NN) -6095 + (LL) 1172
1D Compatibility (HY) -18000 + (ID) 2000
Total energy: -325790.0 ( -145.64 by residue)
QMean score : 0.297
|
|
|