Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MTHTLYPT--------PFALYPI-NISAAWHLGPLPVSCF-VSNK------YQCSLAFGATTGLRV-----------------------------LVVVVPQTQLSFLSSLCLVSLFLHS--LVSAHGEKPTKP----------VGLDPTLFQVVVGI-LGNFSLLY-YYMFLYFRGYKPRSTDL----ILRHLTVADSLVILS------KRIPE-TMATF-----------------GLKHF---DNYFGCKFLLYA----------------------------HRVGRGVSIGSTCLLSVFQVITINPRNSRWAEMKVKAPTYIGLSNI--LCWAFHMLVNAIFPIYTTGKWSNNNIT----KKGDLGYCS-APLSDEVTKSVYAALTSFHDVLCLGLMLWAS-----SSIVLVLYRHKQQVQHICRNNLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDNSSWWLVNTAALIIACFPTISPFV------LMCRDPSRSRLCSICCRRNRRFFHDFRKM--------------------------------- |
| 5CD6 Chain:A ((2-580)) | QTTGVVCEEFDQIQLTHVLTPTGPLPTALDPNGVYPYMSYSETSN-RPVPKRYRMISLENEKVKAIICPDLCGKVISLTHKESGKEVLYRPDVIKYTRILPRFYFVAGGIEVSFPISHSPTQNEPVLYQIDHTGDRTYVTCGERESHYGMQWSVEYSLGDKDECLTQRVVYYNPGKQAYPWMSWSNAALPCAPDTQYDFPNGTVLSHASTLDTIDWKTEGTHHERDIKEMTGYFWKTKDVNAFGAYTPSLGSGLYHIADESSTPGIKLWSYGVAGDKEWSMLSTPDRQPYVEIQGGPISDQSIKLELRPGEKKNHVEYWIPTDHPLD--IYSLKVPALRLRPIDRIPLFDWARKNESSIWIALADAYKNKSTLPAAPYPEDGQWAPSGMEDLDDAFRWAIQISPRPERDYWQFHYGTWLAGRERVEEAIEQLSIPDIDLAKALLARLYVRRQAWEKARDTYAAIPETSWLNLHPQLVIERDKVLKKFGTEALPEREKWLDKINASSDEWVVERKVQLLIDKKQYQEAKDLLLSTHFQKVHQTYTRTGLWEQINEGLGLSPQPVPEQLGEDRLARFEYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143538 for 2488 contacts (-57.7/contact) +
2D Compatibility (PS) -39437 + (NN) 10426 + (LL) 248
1D Compatibility (HY) 20800 + (ID) 1200
Total energy: -152701.0 ( -61.38 by residue)
QMean score : -0.032
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