Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPR-GLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4HZR Chain:A ((15-275)) | --------------------------------RLLEKLGDG---VVRRGEWDAPSGKT-VSVAVKCL-----------AMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATR-DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------------SQILHKIDKEGERLPRP-EDCPQD---IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98366 for 1949 contacts (-50.5/contact) +
2D Compatibility (PS) -26675 + (NN) -16596 + (LL) 2540
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -153997.0 ( -79.01 by residue)
QMean score : 0.447
|
|
|