Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS |
| 4CZU Chain:A ((6-256)) | --------------------------GRTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLK----EDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDANGALKVSDFGLSALPQQVREDGLLHDTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPF--EDSNLTSLYKKIFKAEFTCPPW----FSASAKKLIKRILDPNPATRITFAEVIENEWFKKGYKAPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105991 for 1890 contacts (-56.1/contact) +
2D Compatibility (PS) -26476 + (NN) -10065 + (LL) 1092
1D Compatibility (HY) -17600 + (ID) 4150
Total energy: -163190.0 ( -86.34 by residue)
QMean score : 0.445
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