Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVANCGQVVSYLAPCISYAM----GRVSAP-----GGGCCSGVRGLNAAAATPADRKTTCTCLKQQASGIG-------G---IK----------PNLVAGI--PGKCGVNIPYAISQGTDCSKVR
1BEA Chain:A ((15-109))
---------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47396 for 389 contacts (-121.8/contact) +
2D Compatibility (PS) -6479 + (NN) -81 + (LL) 2060
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -54896.0 ( -141.12 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: