Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LMSCGTVNGNLAGCIAYLT----RGAPL------TQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGP------G---LN----------TARAAGL--PSACKVNIPYKISASTNCNTVR
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49111 for 388 contacts (-126.6/contact) +
2D Compatibility (PS) -6719 + (NN) -1902 + (LL) 1324
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -60358.0 ( -155.56 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: