Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
RASKKASCDLMQLSPCVSAFSGVGQGSPSSAC----CSKLKAQGSSC-LCLYKDDPKVKRI----VSSNRTKRVFTACKVPAPNC----------------
1Y02 Chain:A ((20-114))
-----PSC-----KSCGAHFANTARKQTCLDCKKNFCMTCSSQPRLCLLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQPV
General information:
TITO was launched using:
RESULT:
Template:
1Y02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15773 for 369 contacts (-42.7/contact) +
2D Compatibility (PS) -7108 + (NN) -5233 + (LL) 948
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -31366.0 ( -85.00 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_1Y02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y02-query.scw
PDB file :
Tito_Scwrl_1Y02.pdb
: