Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPKC
M034 Chain:A ((7-83))
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPKC
General information:
TITO was launched using:
RESULT:
Template:
M034.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2437 for 507 contacts (4.8/contact) +
2D Compatibility (PS) -6766 + (NN) 2938 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 150
Total energy: 2059.0 ( 4.06 by residue)
QMean score : -0.073
(partial model without unconserved sides chains):
PDB file :
Tito_M034.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M034-query.scw
PDB file :
Tito_Scwrl_M034.pdb
: