Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VCDMDNDDFMACQPAAAATTDPQPAPSEACCATLGKADLRCLCSYKNSPWLSLYNIDPKRAMELPAKCGLTTPPDC
M034 Chain:A ((1-100))
VCDMDNDDFMACQPAAAATTDPQPAPSEACCATLGKADLRCLCSYKNSPWLSLYNIDPKRAMELPAKCGLTTPPDC
General information:
TITO was launched using:
RESULT:
Template:
M034.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29589 for 558 contacts (-53.0/contact) +
2D Compatibility (PS) -8117 + (NN) -9514 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3800
Total energy: -60620.0 ( -108.64 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_M034.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M034-query.scw
PDB file :
Tito_Scwrl_M034.pdb
: