Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IC----NLSDAGLQACKPAAA---VRNPADTPS-SECCDALAAADLPCLC------------RYKGSAGARVWVRFYGIDLNRAMTLPGKCGLTLPAHC-----------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRR-----EVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28312 for 404 contacts (-70.1/contact) +
2D Compatibility (PS) -7898 + (NN) -2136 + (LL) 672
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -41224.0 ( -102.04 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: