Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MSICDMDINDMQKCRPAITGNNPPPPV-----------NDCCVVVRKANFECLC-RFKFYL--PILRIDPSKVVA----LVAKCGVTTVPRSCQV
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQME----EAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNL--MSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50619 for 443 contacts (-114.3/contact) +
2D Compatibility (PS) -7381 + (NN) -6402 + (LL) 496
1D Compatibility (HY) -7600 + (ID) 700
Total energy: -72206.0 ( -162.99 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: