Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KMVTYPNGDRHCVMAQGQVISACLQQANGLPHADCCYAINDVNRYVETIYGRLALCKCFQEILKDS------R-------FTKLIGMPEKCAIPNAVPFDPKTDCDRFVEHIWLKMF
1PSY Chain:A ((63-116))
-------------------------------LQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26909 for 211 contacts (-127.5/contact) +
2D Compatibility (PS) -3937 + (NN) 3 + (LL) 4044
1D Compatibility (HY) -800 + (ID) 350
Total energy: -27949.0 ( -132.46 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: