Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVNPCVAYGL----GR-A---PIAPCCRALNDLRFVDSRNLRRAACRCLVGVVNRNP---GLR------R---NNRFQNVPGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
1HSS Chain:A ((15-103))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS-------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41829 for 376 contacts (-111.2/contact) +
2D Compatibility (PS) -5854 + (NN) -776 + (LL) 3156
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -50203.0 ( -133.52 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: