Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCTVVTKALGPCMTYLKGTG--A-T--PPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTK---S---------LNYKVAARLASQCGVRMSYSVSPNVNCNSVQ
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40261 for 443 contacts (-90.9/contact) +
2D Compatibility (PS) -6249 + (NN) 2649 + (LL) 2224
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -47387.0 ( -106.97 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: