Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGTVSGYVAPCIGYLAQG---AP------------------ALPRACCSGVTSLNNLARTTPDRQQACRCLVGAANAFP--T-L-------NAARAAGLPKACGVNIPYKISKTTNCNSVK
1PSY Chain:A ((25-122))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--RCMRQT--------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40564 for 508 contacts (-79.9/contact) +
2D Compatibility (PS) -6825 + (NN) -1549 + (LL) 968
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -51970.0 ( -102.30 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: