Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APYTEALSCGQVSSSLAPCISYLT----KGGAV------PPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSIS-------G---VN----------AGNAASF--PGKCGVSIPYKISPSTDCSKVQ
1BEA Chain:A ((15-109))
-------------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42910 for 380 contacts (-112.9/contact) +
2D Compatibility (PS) -6420 + (NN) -837 + (LL) 1464
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -53353.0 ( -140.40 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: