Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EPAPAPAPGEEACGKVVQDIMPCLHFVKGEE----K--------EPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGIS-GI----KNELVAEVPKKCDIKTTLPPITADFDCSKIQST
1S6D Chain:A ((19-97))
-----------------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDE--------KCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM------------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12640 for 400 contacts (-31.6/contact) +
2D Compatibility (PS) -6357 + (NN) -3335 + (LL) 2060
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -23972.0 ( -59.93 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: