Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ESAISCGTVTSDLTQCVGYLTSG---KG------------------KPTPSCCGGVKKLADLASTTPARRAVCGCLKQAYSQFP------NV----NSAAVSGLPGACGVNLPFKISLQTNCNTIN
1PSY Chain:A ((25-122))
----------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV--RCMRQT--------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35678 for 492 contacts (-72.5/contact) +
2D Compatibility (PS) -6100 + (NN) 1620 + (LL) 1240
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -41618.0 ( -84.59 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: