Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGTVVTRLTPCLTYLR----SGGAV------APACCNGVKALNNDAKTTPDRQAACGCLKTASTSIS-------G---IQ----------LGNAASL--AGKCGVNLPYKISPTIDCSKVK
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41961 for 380 contacts (-110.4/contact) +
2D Compatibility (PS) -6480 + (NN) -1426 + (LL) 1376
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -52341.0 ( -137.74 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: