Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AITCGQVSSSLAPCIPYVRG---GGAVPP----ACCNGIRNVNNLARTTPDRQAACNCLKQLSASV-------PGVN----PNNAAALPGKCGVSIPYKISASTNCATVK---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54356 for 509 contacts (-106.8/contact) +
2D Compatibility (PS) -7979 + (NN) -1893 + (LL) 576
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -71952.0 ( -141.36 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: