Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNCGQVNKALSSCVPFLTGF--D-TTP---SLTCCAGVMELKRLAPTVKDKRIACECVKTAAARY-------PN----IREDAASSLPYKCGVVINVPISKTTNCHEIN
1HSS Chain:A ((15-103))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49978 for 405 contacts (-123.4/contact) +
2D Compatibility (PS) -6393 + (NN) -1720 + (LL) 1444
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -61347.0 ( -151.47 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: