Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------AITCGQVGSSLAPCIPYATGRASALPASCCSGVKSLNSAARTSADRQAACRCLKSLANSVKSVNMGTVATIPGKCGVSVGFPISMSTDCNKIS
1A0P Chain:? ((3-100))
QDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLSSARLLSAVRRLFQYLYREKFREDDPSAHL----------------------
General information:
TITO was launched using:
RESULT:
Template:
1A0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28160 for 461 contacts (-61.1/contact) +
2D Compatibility (PS) -6812 + (NN) 3304 + (LL) 360
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -33908.0 ( -73.55 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1A0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A0P-query.scw
PDB file :
Tito_Scwrl_1A0P.pdb
: