Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------VTCQVTQL---APCASAISSSSPPSSQCCAKIKEQKPCLCQYMKNPSLKAYVSSPNAKKVANACGVPIPKC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1PS6 Chain:A ((1-328)) | VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6182 for 336 contacts (-18.4/contact) +
2D Compatibility (PS) -7388 + (NN) -5327 + (LL) 0
1D Compatibility (HY) 800 + (ID) 600
Total energy: -18697.0 ( -55.65 by residue)
QMean score : 0.422
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