Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVTPPNPTAPSADCCSALSH-ADLN---CLCS-YKNSNLLPSLGIDPKLAMQLPGKCKLPHPA--NC---
1HYP Chain:? ((6-80))
--PSCP----DLSICLNILGGSLG--TVDDCCALIGGLGDIEAIVCLCIQLRALGILNL----NRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21720 for 371 contacts (-58.5/contact) +
2D Compatibility (PS) -6823 + (NN) -7444 + (LL) 824
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -40663.0 ( -109.60 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: