Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NGPCSNTLSSLSACMPAIEGENPQSPSVACCDVVRG-SDAS---CLCSIVTTYANLTDAMGI-NLRAALLL-PKQCKRAVPSGFTCGEID
1HYP Chain:? ((6-80))
--P---SCPDLSICLNILGGSLG--TVDDCCALIGGLGDIEAIVCLCIQ-------LRALGILNLNRNLQLILNSCGRSYPSNATCPRT-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40392 for 403 contacts (-100.2/contact) +
2D Compatibility (PS) -7401 + (NN) -5796 + (LL) 340
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -60499.0 ( -150.12 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: