Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVTLC----GMTKEGFASCKPSVQ---TGVNPLPPS-YSCCSALEKADLSCLCF----FKKNYPKMLTDN-NID----PNLAMQLPAKCNMAGSFSCK----------------
1HSS Chain:A ((5-124))
---MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34437 for 454 contacts (-75.9/contact) +
2D Compatibility (PS) -7720 + (NN) 720 + (LL) 364
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -44523.0 ( -98.07 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: