Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADDDAVLLC----NMTRGGLEACKPSVR-SGSSDPAADPS-KECCAALAGADLPCLCS---------YRHSFLLPSLGID----PDLALQLPAKCNLTATPGC-----------------
1HSS Chain:A ((5-124))
-------MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFP--RCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32641 for 425 contacts (-76.8/contact) +
2D Compatibility (PS) -8009 + (NN) -4105 + (LL) 576
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -49079.0 ( -115.48 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: