Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCSSVTKQLTPCLSYLT----SGGA-P-----TAACCGGVKSLNGMASMSTPDRQATCNCLKAASKGI-------------N----------LQNAVSL--PAKCGVKIGYSISPNTDCSKVR
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31674 for 368 contacts (-86.1/contact) +
2D Compatibility (PS) -6065 + (NN) -2094 + (LL) 1176
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -42157.0 ( -114.56 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: