Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AGECGKNTTPDMEAFKMAPCASAAQDENSSVSSQCCARVKKIGQNPACLCAVMLS------------NTAKSSGIKPEIAMTIPKRCNIADRPVGYKCGAYTLP-------------
1PP7 Chain:U ((5-118))
DLEASFTSRLPPEIVAALK----RKSSRDPNSRFPRKLHMLLTYLASNPQLEEEIGLSWISDTEFKMKKKNVALVMGIKLN-TLNVNLR-DLAFEQLQHDKGGWTQWKRSGFTRNSVFED
General information:
TITO was launched using:
RESULT:
Template:
1PP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7982 for 508 contacts (15.7/contact) +
2D Compatibility (PS) -8998 + (NN) -1944 + (LL) 528
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -6182.0 ( -12.17 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_1PP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PP7-query.scw
PDB file :
Tito_Scwrl_1PP7.pdb
: