Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAEVSCGDAVSALIPCGSFLVGAVAG--------------APSESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSF---GV--------LPDRARQLPALCKLGISIPVSPHTDCDKIQ
1SM7 Chain:A ((14-101))
-----------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45036 for 423 contacts (-106.5/contact) +
2D Compatibility (PS) -5877 + (NN) 4075 + (LL) 1268
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -50370.0 ( -119.08 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: