Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAACASKLTPCFPFLNNATA----------QP-----------TADCCNPIKDTVANDLECLCNLYNDP--NLLSSLN-------ITVAAALRISRECGVTTDLSACNV
1PSY Chain:A ((26-116))
------DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18600 for 393 contacts (-47.3/contact) +
2D Compatibility (PS) -6313 + (NN) -3307 + (LL) 1324
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -29696.0 ( -75.56 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: