Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVPCNTVDAKAAACVGFAT----GKATKP-----SAECCTGLQQLAQTVKSVDDKKAICRCLKAAAKSL----GI-------Q----------DKFLSKI--PQACNINVGFPVSINTNCETIH
1BEA Chain:A ((16-109))
---------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38272 for 367 contacts (-104.3/contact) +
2D Compatibility (PS) -6369 + (NN) -3732 + (LL) 1856
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -49067.0 ( -133.70 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: