Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCQQALTELIPCRPFLIAT----APS-P----TAPCCTGVSDVKAAASTTEARRDLCECFEKNAPGY----G---------V-----K----PEKAKLLPGLCGVTVPVPIDPSVNCTTIT
1B1U Chain:A ((16-109))
--------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34019 for 392 contacts (-86.8/contact) +
2D Compatibility (PS) -6182 + (NN) 632 + (LL) 1952
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -41017.0 ( -104.64 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: