Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDILKLTPCVAASRNAKVMPSRQCCSNIAGMGKGLPGAKCLCSLLSHPLARSQGV-APRIALG-IPQKCRIAVPRGFVCQGIRVPGS
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGG-SLGTVDDCCALIGGL------GDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYPSNATC-----PRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41224 for 478 contacts (-86.2/contact) +
2D Compatibility (PS) -7414 + (NN) -1547 + (LL) 552
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -54383.0 ( -113.77 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: