Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACGSSYDLAACLPAAESDIQPSAQCCTQLSSYLATDTPEECLCQTAYSPFFQSGA-DIQFAIK-IPQKCNLSYRAGIQCNGNTIPGGQ
1HYP Chain:? ((6-80))
--PSCPDLSICLNILGGSLGTVDDCCALIGG-LGDIEAIVCLCIQLRA----LGILNLNRNLQLILNSCGRSYPSNATCPRT------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34216 for 478 contacts (-71.6/contact) +
2D Compatibility (PS) -7620 + (NN) -1790 + (LL) 428
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -48848.0 ( -102.19 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: