Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACNAMTLQPCLAASQGKVAPDPACCTAIKNIGLSA-DGPQCLCTLATGPLAKANGV-SADAAMAIP-KKCGLPVPKGFMCNNKPVPGS
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGGSLGTVDDCCALIG--GLGDIEAIVCLCIQLRA-----LGILNLNRNLQLILNSCGRSYPSNATC-----PRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29271 for 460 contacts (-63.6/contact) +
2D Compatibility (PS) -7543 + (NN) -3806 + (LL) 820
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -46350.0 ( -100.76 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: