Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSLEILENR------IRD---SDHQFTRYAVCECFKASDNDKQVLVNENLLEVQVLCGP----HVPYPITSYSDCLQYADEEIARTAL
2HFT Chain:? ((107-218))
-----NLGQPTIQSFE---QVGTKV----NVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLY-----YWKSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTV-NRKSTDSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34595 for 531 contacts (-65.2/contact) +
2D Compatibility (PS) -9694 + (NN) 3561 + (LL) 1596
1D Compatibility (HY) 800 + (ID) 1050
Total energy: -39382.0 ( -74.17 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: