Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDACTGLPGLLNCAPFLLGS----VS-----------SPDAKCCKSLKWLSQHAINRKDKRELCKCLKVEDLKHK--G----V----ILDRAKSLPRLCKVQLPAPLIPDNIDCDKIKAADEE
1SM7 Chain:A ((14-100))
--------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22916 for 414 contacts (-55.4/contact) +
2D Compatibility (PS) -6376 + (NN) -1767 + (LL) 1388
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -33721.0 ( -81.45 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: